Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs7220642 | chr17:80840245 | C/G | 0.00011 | 210 | 15.1 | 17.2 | 13.17 | KM Plot |
KIRP | rs7221057 | chr17:80840138 | A/G | 5.17E-5 | 207 | 15.33 | 17.2 | 13.17 | KM Plot |
KIRP | rs7231881 | chr18:47475917 | C/G | 0.000645 | 214 | 17.02 | 11.02 | 0 | KM Plot |
KIRP | rs723327 | chr10:63446522 | A/G | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
KIRP | rs72386143 | chr5:79953470 | GA/G | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
KIRP | rs72488269 | chr14:23730375 | A/G | 6.42E-5 | 204 | 16.43 | 19.02 | 16.53 | KM Plot |
KIRP | rs7251466 | chr19:42576952 | C/G | 0.000332 | 214 | 14.87 | 17.1 | 11.2 | KM Plot |
KIRP | rs7251641 | chr19:43559330 | C/T | 0 | 214 | 14.85 | 18.47 | 6.7 | KM Plot |
KIRP | rs72623695 | chr15:24503700 | C/A | 0.000447 | 214 | 17 | 14.53 | 9.48 | KM Plot |
KIRP | rs72623697 | chr15:24504295 | C/T | 8.89E-5 | 209 | 17 | 14.1 | 8.73 | KM Plot |
KIRP | rs72623698 | chr15:24504365 | C/G | 9.22E-5 | 209 | 16.97 | 14.25 | 8.73 | KM Plot |
KIRP | rs72623699 | chr15:24504375 | T/G | 9.22E-5 | 209 | 16.97 | 14.25 | 8.73 | KM Plot |
KIRP | rs72623701 | chr15:24504416 | C/T | 9.22E-5 | 208 | 16.97 | 14.53 | 8.73 | KM Plot |
KIRP | rs72623702 | chr15:24505128 | C/T | 0.000217 | 211 | 16.97 | 15.07 | 9.48 | KM Plot |
KIRP | rs72625103 | chr15:24507987 | G/A | 6.5E-5 | 209 | 17.02 | 14.8 | 10.23 | KM Plot |